Diagnostic performances of the Xpert® Flu PCR test and the OSOM® immunochromatographic rapid test for influenza A and B virus among adult patients in the Emergency Department
Section snippets
Background
Respiratory viruses are responsible for significant morbidity and mortality in both children and adults [1]. The predictive value of symptoms and clinical signs for the diagnosis of influenza is very low, regardless of the viral strain involved [[2], [3], [4], [5], [6]]. Early implementation of antiviral treatment and isolation measures depend on rapid diagnosis of influenza [[7], [8], [9], [10]]. Moreover, the use of testing for respiratory viruses within the ED in adults was recently
Objectives
The objectives of this study were to estimate the clinical performances of a new commercially available RIDT, which included the antigens of new circulating strains and modified sample collection system, antigen extraction and reading cassette, and that can be performed at point-of-care [18] (OSOM® Ultra Flu A&B Test), and a reference NAAT performed in the virology laboratory (Xpert® Flu PCR test) on clinical samples from the last influenza epidemic season, comparing their results with a
Study population and period
Patients seen in the ED during the 2016–2017 epidemic period and presenting one of the following criteria were included [19]: i) suspected influenza based on clinical criteria (influenza-like syndromes); ii) pneumopathy; iii) presence of signs of severity: polypnoea, cyanosis, oxygen saturation Spa02 <95%, pneumonia, wheeze, tachycardia, hypotension, areas of mottled skin, malaise, change in mental status, oliguria; iv) presence of underlying clinical conditions indicating an increased risk of
Results
During the 2016–2017 epidemic period, 1099 patients were identified with suspected influenza and were tested. Finally, 233 (233/1099 (21.2%)) produced a positive influenza NAAT. Among them, 420 patients were selected at random. Given the low prevalence of influenza B, the 20 cases of influenza B and 60 control cases selected at random from the overall population were included in the study population. The study population comprised 500 patients at that point. The characteristics of the overall
Discussion
Our study in adult emergency patients seen during the 2016–2017 influenza epidemic season revealed excellent diagnostic performances for both the Xpert® Flu PCR and the OSOM® Ultra Flu A&B Test. Similarly, we demonstrated excellent results in the assessing variability in reading the OSOM® Ultra Flu A&B Test performed by ED personnel following a brief training session.
Difficulties in diagnosing influenza within Emergency Departments are linked to the diversity of clinical pictures that can be
Conflicts of interest
None to declare.
Funding
None
Ethical approval
The dataset was completely anonymous and did not contain any identifiable personal health information. The protocol was approved by the Assistance Publique-Hôpitaux de Paris ethics, research and informatics committees.
Authors contributions
SA, NF, AG, HI, PGG, DB, PK, CC, BV and EC conceived the study and designed the trial. SA, NF, AG and EC supervised the conduct of the trial and data collection. SA, NF, AG, HI, PGG, DB, PK, CC, BV and EC undertook recruitment of patients and managed the data, including quality control. SA, NF, AG, BV and EC provided statistical advice on study design and analysed the data. SA, NF, AG and EC drafted the manuscript, and all authors contributed substantially to its revision. EC takes
Acknowledgments
None.
References (28)
- et al.
Routine molecular point-of-care testing for respiratory viruses in adults presenting to hospital with acute respiratory illness (ResPOC): a pragmatic, open-label, randomised controlled trial
Lancet Respir. Med.
(2017) - et al.
Contribution of a rapid influenza diagnostic test to manage hospitalized patients with suspected influenza
Diagn. Microbiol. Infect. Dis.
(2017) - et al.
Diagnostic accuracy and cost analysis of the Alere™ i Influenza A&B near-patient test using throat swabs
J. Hosp. Infect.
(2017) - et al.
Evaluation of the rapid influenza detection tests GOLD SIGN FLU and Quick Navi-Flu for the detection of influenza A and B virus antigens in adults during the influenza season
Int. J. Infect. Dis.
(2016) - et al.
Evaluation of Sofia fluorescent immunoassay analyzer for influenza A/B virus
J. Clin. Virol.
(2012) - et al.
H1N1 and seasonal H3N2 influenza infection in the human population show different distributions of viral loads, which substantially affect the performance of rapid influenza tests
Virus Res.
(2011) - et al.
Quantitative analysis of four rapid antigen assays for detection of pandemic H1N1 2009 compared with seasonal H1N1 and H3N2 influenza A viruses on nasopharyngeal aspirates from patients with influenza
J. Virol. Methods
(2012) - et al.
Analytical performance of the Alere™ i Influenza A&B assay for the rapid detection of influenza viruses
Enferm. Infecc. Microbiol. Clin.
(2017) - et al.
Estimating influenza-associated deaths in the United States
Am. J. Public Health
(2009) - et al.
Predictive symptoms and signs of laboratory-confirmed influenza: a prospective surveillance study of two metropolitan areas in Taiwan
Medicine (Baltimore)
(2015)
Clinical predictors for laboratory-confirmed influenza infections: exploring case definitions for influenza-like illness
Infect. Control Hosp. Epidemiol.
Clinical and radiographic comparison of influenza virus-associated pneumonia among three viral subtypes
Intern. Med.
Should clinical case definitions of influenza in hospitalized older adults include fever?
Influenza Other Respir. Viruses
Respiratory viral detection in children and adults: comparing asymptomatic controls and patients with community-acquired pneumonia
J. Infect. Dis.
Cited by (10)
Comparative practicability and analytical performances of Credo VitaPCR™ Flu A&B and Cepheid Xpert® Xpress Flu/RSV platforms
2021, Diagnostic Microbiology and Infectious DiseaseCitation Excerpt :Previous studies on Xpert® Xpress for influenza A/B detection reported analytical performances similar as in our hands, with sensitivity ranging from 93.8-100% (Novak-Weekley et al., 2012), 94.6% (Gimferrer et al., 2018), 95.3% (Dugas et al., 2014), 97.0% (Valentin et al., 2019), 98.4% (Antoniol et al., 2018) to 97. %-100% (Kanwar et al., 2020), and specificity from 97.7-98.2% (Kanwar et al., 2020), 97.8-100% (Ling et al., 2018), 98.2% (Valentin et al., 2019), 99.2% (Dugas et al., 2014), 99.7% (Antoniol et al., 2018), 99.2-100% (Novak-Weekley et al., 2012) to 100% (Gimferrer et al., 2018; Ling et al., 2018). These performances are comparable to those obtained with other NAATs for influenza qualitative detection (Nguyen Van et al., 2016; Valentin et al., 2019; Farfour et al., 2020; Kanwar et al., 2020; Wabe et al., 2020).
Role of the Clinical Microbiology Laboratory in Antimicrobial Stewardship
2018, Medical Clinics of North AmericaCitation Excerpt :Further, in patients in whom RSV is detected and the flu test result is negative, the message from the laboratory could be, “Consider suspending both antiinfluenza treatment such as oseltamivir and antibacterial treatment.” This new flu test based on nucleic acid detection at a reasonable laboratory price has been a significant advance in recent years.6–11 We now describe an example of how routine urocultures can be improved and streamlined in hospitalized patients.
INFLUENZA
2022, Laboratory Screening and Diagnostic Evaluation: An Evidence-Based ApproachEconomic benefits of COVID-19 screening tests
2020, medRxiv
- 1
ED-study group on respiratory viruses: Julien Bernard, MD; Anne Casaubieilh, Nurse practitioner; Abigael Debit, MD; Elise Dupeyrat, MD; Pierre Gauthier-Gentès, MD; Madline Gillo, MD; Yoan Gil, MD, Suzanne Goncalves, Nurse practitioner; Neila Laurent, Head staff nurse; Michèle Macaux, Head staff nurse; Jeanne Pigeau, Head staff nurse; Laurent Pereira, MD, Ranaivoson Michel, MD; Sabrina Rouleau, Head staff nurse.